Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| resolvase transposon tn3 | SAMEA3485113_00933 | Not Available | Positive | 977882 - 978439 | 20604.8 |
| beta-lactamase tem | SAMEA3485113_00934 | Not Available | Positive | 978622 - 979482 | 31517.0 |
| aminoglycoside adenylyltransferase | SAMEA3485113_00935 | Not Available | Negative | 979789 - 980577 | 29204.8 |
| tdp-fucosamine acetyltransferase | SAMEA3485113_00936 | Not Available | Negative | 980635 - 981159 | 19671.9 |
| dihydrofolate reductase type i dhfra1 | SAMEA3485113_00937 | Not Available | Negative | 981254 - 981727 | 17576.1 |
| class 1 integron integrase protein inti1 | SAMEA3485113_00938 | Not Available | Positive | 982059 - 982595 | 20469.1 |
| class 1 integron integrase protein inti1 | SAMEA3485113_00939 | Not Available | Positive | 982710 - 983036 | 12012.6 |
| dna-binding protein | SAMEA3485113_00940 | Not Available | Negative | 984395 - 984676 | 10928.2 |
| toxin-antitoxin system, toxin component | SAMEA3485113_00941 | Not Available | Negative | 984657 - 984986 | 12520.5 |
| sigma-70 region 4 type 2 | SAMEA3485113_00944 | Not Available | Positive | 988166 - 988453 | 10807.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





