Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3485113_00923 | Not Available | Positive | 968595 - 968819 | 8618.07 |
| tetracycline efflux protein | SAMEA3485113_00924 | Not Available | Negative | 968750 - 969949 | 42350.7 |
| tetracycline repressor protein | SAMEA3485113_00925 | Not Available | Positive | 970028 - 970705 | 24316.8 |
| relaxase | SAMEA3485113_00926 | Not Available | Negative | 970737 - 970979 | 8907.68 |
| streptomycin phosphotransferase | SAMEA3485113_00927 | Not Available | Negative | 971285 - 972121 | 30825.7 |
| streptomycin resistance protein, stra | SAMEA3485113_00928 | Not Available | Negative | 972121 - 972924 | 29588.2 |
| dihydropteroate synthase | SAMEA3485113_00929 | Not Available | Negative | 972985 - 973998 | 36217.7 |
| uncharacterised protein | SAMEA3485113_00930 | Not Available | Positive | 974014 - 974286 | 10816.7 |
| putative is1294 transposase | SAMEA3485113_00931 | Not Available | Positive | 974267 - 974716 | 16871.1 |
| transposase, transposon tn3 | SAMEA3485113_00932 | Not Available | Negative | 974713 - 977718 | 113130.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





