Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3485113_00902 | Not Available | Positive | 953096 - 953461 | 13441.2 |
| putative type iv conjugative transfer system protein tral | SAMEA3485113_00903 | Not Available | Positive | 953606 - 953887 | 10702.6 |
| putative type iv conjugative transfer system protein trae | SAMEA3485113_00904 | Not Available | Positive | 953884 - 954510 | 24214.8 |
| trhk | SAMEA3485113_00905 | Not Available | Positive | 954494 - 955411 | 32582.5 |
| putative type iv conjugative transfer system protein trab | SAMEA3485113_00906 | Not Available | Positive | 955408 - 956724 | 47524.4 |
| type iv conjugative transfer system protein trav | SAMEA3485113_00907 | Not Available | Positive | 956721 - 957299 | 20783.6 |
| type iv conjugative transfer system protein traa | SAMEA3485113_00908 | Not Available | Positive | 957312 - 957695 | 13046.1 |
| isecp1 transposase | SAMEA3485113_00909 | Not Available | Positive | 957980 - 959242 | 48559.7 |
| uncharacterised protein | SAMEA3485113_00910 | Not Available | Positive | 959223 - 959345 | 4677.9 |
| beta-lactamase protein ampc | SAMEA3485113_00911 | Not Available | Positive | 959566 - 960711 | 42005.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





