Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system transporter subunit iia | SAMEA3485113_00801 | Not Available | Positive | 853499 - 853939 | 16563.0 |
| putative polysaccharide deacetylase | SAMEA3485113_00802 | Not Available | Positive | 854003 - 855232 | 46370.9 |
| aspartate l-decarboxylase | SAMEA3485113_00803 | Not Available | Negative | 855236 - 855616 | 13834.5 |
| putative transposase | SAMEA3485113_00804 | Not Available | Positive | 855890 - 856834 | 36475.9 |
| putative transposase | SAMEA3485113_00805 | Not Available | Positive | 856903 - 857118 | 8306.08 |
| pantoate--beta-alanine ligase | SAMEA3485113_00806 | Not Available | Negative | 857200 - 858051 | 31622.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SAMEA3485113_00807 | Not Available | Negative | 858063 - 858857 | 28179.1 |
| putative fimbrial protein | SAMEA3485113_00808 | Not Available | Negative | 858971 - 860221 | 45281.8 |
| putative fimbrial protein | SAMEA3485113_00809 | Not Available | Negative | 860273 - 860872 | 21394.4 |
| putative fimbrial protein | SAMEA3485113_00810 | Not Available | Negative | 860886 - 861446 | 20094.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





