Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein family (upf0231) | SAMEA3485113_00791 | Not Available | Positive | 843465 - 843827 | 13978.3 |
| s-adenosylmethionine decarboxylase proenzyme | SAMEA3485113_00792 | Not Available | Negative | 843865 - 844659 | 30386.3 |
| spermidine synthase | SAMEA3485113_00793 | Not Available | Negative | 844675 - 845541 | 32380.2 |
| protein | SAMEA3485113_00794 | Not Available | Negative | 845647 - 845994 | 12884.4 |
| multicopper oxidase | SAMEA3485113_00795 | Not Available | Positive | 846160 - 847710 | 56617.6 |
| glucose dehydrogenase | SAMEA3485113_00796 | Not Available | Negative | 847757 - 850147 | 86752.1 |
| hypoxanthine-guanine phosphoribosyltransferase | SAMEA3485113_00797 | Not Available | Positive | 850353 - 850889 | 20116.4 |
| carbonic anhydrase 2 yadf | SAMEA3485113_00798 | Not Available | Negative | 850930 - 851592 | 25098.2 |
| abc transporter atp-binding protein | SAMEA3485113_00799 | Not Available | Positive | 851701 - 852627 | 34663.2 |
| inner membrane transport permease yadh | SAMEA3485113_00800 | Not Available | Positive | 852624 - 853394 | 28517.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





