Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinolinate phosphoribosyltransferase | SAMEA3485113_00780 | Not Available | Negative | 826904 - 827797 | 32775.0 |
| n-acetyl-anhydromuramyl-l-alanine-amidase | SAMEA3485113_00781 | Not Available | Positive | 827885 - 828436 | 20562.2 |
| ampe protein | SAMEA3485113_00782 | Not Available | Positive | 828433 - 829287 | 32230.0 |
| aromatic amino acid transport protein | SAMEA3485113_00783 | Not Available | Negative | 829330 - 830700 | 49547.9 |
| transcriptional regulator protein | SAMEA3485113_00784 | Not Available | Positive | 831244 - 832008 | 29427.2 |
| pyruvate dehydrogenase e1 component | SAMEA3485113_00786 | Not Available | Positive | 832169 - 834832 | 99674.1 |
| dihydrolipoamide acetyltransferase component (e2) of pyruvate dehydrogenase | SAMEA3485113_00787 | Not Available | Positive | 834847 - 836739 | 66085.7 |
| dihydrolipoamide dehydrogenase | SAMEA3485113_00788 | Not Available | Positive | 837064 - 838488 | 50691.4 |
| protein of uncharacterised function (duf3300) | SAMEA3485113_00789 | Not Available | Negative | 838559 - 840316 | 65604.1 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | SAMEA3485113_00790 | Not Available | Positive | 840671 - 843268 | 93503.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





