Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family integral membrane protein | SAMEA3485113_00736 | Not Available | Positive | 780833 - 781597 | 28171.7 |
| thiamine transporter atp-binding subunit | SAMEA3485113_00737 | Not Available | Negative | 781711 - 782409 | 25001.6 |
| thiamine abc transport system, permease protein | SAMEA3485113_00738 | Not Available | Negative | 782393 - 784003 | 59309.4 |
| thiamine transporter substrate binding subunit | SAMEA3485113_00739 | Not Available | Negative | 783979 - 784962 | 36238.3 |
| putative type iii effector protein | SAMEA3485113_00741 | Not Available | Positive | 785333 - 785902 | 21624.4 |
| uncharacterised protein | SAMEA3485113_00742 | Not Available | Positive | 785868 - 785975 | 3932.03 |
| putative substrate-binding protein | SAMEA3485113_00743 | Not Available | Negative | 786132 - 787790 | 64140.9 |
| 3-isopropylmalate dehydratase small subunit | SAMEA3485113_00745 | Not Available | Negative | 788118 - 788723 | 22604.8 |
| 3-isopropylmalate dehydratase large subunit | SAMEA3485113_00746 | Not Available | Negative | 788734 - 790134 | 49883.7 |
| 3-isopropylmalate dehydrogenase | SAMEA3485113_00747 | Not Available | Negative | 790137 - 791228 | 39466.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





