Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative lom-like outer membrane protein | SAMEA3753097_00001 | Not Available | Positive | 86 - 616 | 19624.5 |
| Trna-thr; | Not Available | Not Available | Positive | 120 - 195 | Not Available |
| Trna-asp; | Not Available | Not Available | Positive | 160 - 236 | Not Available |
| Trna-glu; | Not Available | Not Available | Positive | 141 - 216 | Not Available |
| Trna-trp; | Not Available | Not Available | Positive | 245 - 320 | Not Available |
| Trna-arg; | Not Available | Not Available | Positive | 208 - 282 | Not Available |
| Trna-lys; | Not Available | Not Available | Positive | 296 - 371 | Not Available |
| Trna-met; | Not Available | Not Available | Positive | 373 - 448 | Not Available |
| Putative tail fiber protein | SAMEA3753097_00002 | Not Available | Positive | 768 - 2072 | 44071.1 |
| Tail protein | SAMEA3753097_00003 | Not Available | Positive | 2074 - 2343 | 9976.31 |
Pathways
1368 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bloody diarrhea | Causes | PMC9147554 |
| Hemorrhagic colitis | Causes | PMC9147554 |
| Hemolytic uremic syndrome | Causes | PMC9147554 |
| Hus | Causes | PMC9147554 |
| Calf diarrhea | Causes | PMC9861278 |
| Sbp | Causes | PMC10556727 |
| Ie | Causes | PMC10972404 |
| Pregnancy loss | Causes | PMC11597549 |
| Neonatal death | Causes | PMC11597549 |
| Abortion | Causes | PMC11597549 |





