Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacteriophage recombination protein | SAMEA3753097_05430 | Not Available | Positive | 5397059 - 5397844 | 29720.3 |
| gtp-binding protein | SAMEA3753097_05432 | Not Available | Positive | 5397970 - 5399154 | 43493.1 |
| acyltransferase | SAMEA3753097_05433 | Not Available | Negative | 5399195 - 5399764 | 22343.1 |
| phage protein yjhs encoded within prophage cp-933o | SAMEA3753097_05435 | Not Available | Negative | 5400476 - 5401012 | 19050.8 |
| phage protein yjhs encoded within prophage cp-933o | SAMEA3753097_05436 | Not Available | Negative | 5401155 - 5401661 | 18547.9 |
| uncharacterised protein | SAMEA3753097_05437 | Not Available | Positive | 5402193 - 5402735 | 20591.4 |
| uncharacterised protein | SAMEA3753097_05438 | Not Available | Positive | 5402865 - 5402987 | 4795.81 |
| t3ss secreted effector nlea-like protein | SAMEA3753097_05439 | Not Available | Negative | 5403216 - 5403587 | 13642.8 |
| putative superinfection exclusion protein b of prophage | SAMEA3753097_05440 | Not Available | Negative | 5403747 - 5404217 | 18033.2 |
| restriction alleviation protein | SAMEA3753097_05441 | Not Available | Positive | 5404431 - 5404631 | 7814.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





