Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid sos inhibition protein a | SAMEA3753097_05381 | Not Available | Positive | 5357742 - 5358461 | 27682.8 |
| relaxase/mobilization nuclease domain-containing protein | SAMEA3753097_05384 | Not Available | Positive | 5360963 - 5362159 | 46508.5 |
| conjugal transfer protein, trbc | SAMEA3753097_05385 | Not Available | Negative | 5362196 - 5363887 | 63782.7 |
| is2 insertion element transposase insab' | SAMEA3753097_05387 | Not Available | Positive | 5364419 - 5365075 | 24725.3 |
| dna damage-inducible protein | SAMEA3753097_05388 | Not Available | Positive | 5365164 - 5365412 | 9392.14 |
| t3ss effector espk | SAMEA3753097_05390 | Not Available | Positive | 5366054 - 5367415 | 50543.4 |
| prophage tail fiber c-terminus family protein | SAMEA3753097_05391 | Not Available | Negative | 5367867 - 5368136 | 9937.22 |
| tail fiber protein | SAMEA3753097_05392 | Not Available | Negative | 5368138 - 5368416 | 9846.38 |
| prophage tail fiber domain-containing protein | SAMEA3753097_05393 | Not Available | Negative | 5368957 - 5369715 | 25978.7 |
| uncharacterised protein | SAMEA3753097_05394 | Not Available | Negative | 5369785 - 5371191 | 53029.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





