Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catabolic threonine dehydratase | SAMEA3753097_05338 | Not Available | Negative | 5321914 - 5322903 | 35248.6 |
| tdc operon transcriptional activator | SAMEA3753097_05339 | Not Available | Negative | 5323002 - 5323940 | 34468.8 |
| protein | SAMEA3753097_05340 | Not Available | Positive | 5324729 - 5325268 | 20577.6 |
| uncharacterised protein | SAMEA3753097_05341 | Not Available | Positive | 5325290 - 5326393 | 41794.6 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SAMEA3753097_05344 | Not Available | Negative | 5327405 - 5328484 | 36989.3 |
| cobalamin synthase | SAMEA3753097_05345 | Not Available | Negative | 5328496 - 5329239 | 26387.3 |
| bifunctional adenosylcobalamin biosynthesis protein | SAMEA3753097_05346 | Not Available | Negative | 5329236 - 5329778 | 20034.0 |
| putative transposase, isec23 | SAMEA3753097_05347 | Not Available | Positive | 5331520 - 5331636 | 4238.2 |
| carbohydrate kinase | SAMEA3753097_05348 | Not Available | Positive | 5331832 - 5333046 | 43667.9 |
| cytoplasmic protein | SAMEA3753097_05349 | Not Available | Positive | 5333060 - 5333275 | 8156.69 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





