Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trax | SAMEA3753097_05298 | Not Available | Negative | 5279507 - 5280091 | 22526.6 |
| conjugal transfer protein traw | SAMEA3753097_05299 | Not Available | Negative | 5280120 - 5281322 | 42857.0 |
| protein ydia | SAMEA3753097_05300 | Not Available | Negative | 5281918 - 5282766 | 32195.6 |
| uncharacterised protein | SAMEA3753097_05301 | Not Available | Positive | 5283347 - 5283598 | 9909.82 |
| putative transposase | SAMEA3753097_05302 | Not Available | Negative | 5283629 - 5283787 | 5929.19 |
| putative transposase | SAMEA3753097_05303 | Not Available | Negative | 5283849 - 5284775 | 35526.2 |
| uncharacterised protein | SAMEA3753097_05304 | Not Available | Negative | 5284840 - 5285106 | 10514.9 |
| uncharacterised protein | SAMEA3753097_05305 | Not Available | Negative | 5285200 - 5285634 | 16536.6 |
| antirestriction arda family protein | SAMEA3753097_05306 | Not Available | Negative | 5286363 - 5286863 | 19176.8 |
| ygaa | SAMEA3753097_05307 | Not Available | Negative | 5287325 - 5287921 | 22115.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





