Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trak | SAMEA3753097_05266 | Not Available | Positive | 5241110 - 5243077 | 74023.0 |
| uncharacterised protein | SAMEA3753097_05267 | Not Available | Positive | 5243648 - 5244235 | 22879.4 |
| dna topoisomerase iii | SAMEA3753097_05268 | Not Available | Positive | 5244247 - 5246403 | 79259.5 |
| uncharacterised protein | SAMEA3753097_05269 | Not Available | Positive | 5246548 - 5246805 | 9660.34 |
| uncharacterised protein | SAMEA3753097_05270 | Not Available | Positive | 5247103 - 5247399 | 11415.7 |
| uncharacterised protein | SAMEA3753097_05271 | Not Available | Positive | 5247852 - 5247947 | 3432.54 |
| uncharacterised protein | SAMEA3753097_05272 | Not Available | Negative | 5248382 - 5248549 | 5959.39 |
| yifn | SAMEA3753097_05273 | Not Available | Positive | 5248739 - 5249116 | 13817.0 |
| is91, transposase, truncation | SAMEA3753097_05274 | Not Available | Positive | 5249509 - 5249829 | 12639.8 |
| transposase | SAMEA3753097_05275 | Not Available | Positive | 5250951 - 5251316 | 13442.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





