Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron(iii) dicitrate transport system, permease protein | SAMEA3753097_05205 | Not Available | Positive | 5191928 - 5192926 | 34894.9 |
| iron-dicitrate transporter subunit fecd | SAMEA3753097_05206 | Not Available | Positive | 5192923 - 5193879 | 34120.7 |
| iron(iii) dicitrate transport system, atp-binding protein | SAMEA3753097_05207 | Not Available | Positive | 5193880 - 5194647 | 28173.4 |
| hemagglutinin-related protein | SAMEA3753097_05208 | Not Available | Negative | 5195183 - 5195470 | 9516.81 |
| putative hemolysin activator shlb-type | SAMEA3753097_05209 | Not Available | Negative | 5195442 - 5196332 | 32548.2 |
| transposase | SAMEA3753097_05210 | Not Available | Negative | 5197251 - 5197409 | 6090.38 |
| transposase orf1 of is3 family is element | SAMEA3753097_05211 | Not Available | Negative | 5197622 - 5197924 | 11583.1 |
| inner membrane protein | SAMEA3753097_05212 | Not Available | Positive | 5198137 - 5199663 | 57531.0 |
| outer membrane autotransporter barrel domain-containing protein | SAMEA3753097_05213 | Not Available | Negative | 5199964 - 5203830 | 131274.0 |
| glycosyltransferase | SAMEA3753097_05214 | Not Available | Negative | 5203830 - 5205005 | 44732.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





