Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamin phosphate synthase | SAMEA3753097_05170 | Not Available | Positive | 5157789 - 5158205 | 15656.8 |
| putative cytoplasmic protein yjbr | SAMEA3753097_05171 | Not Available | Positive | 5158209 - 5158565 | 13520.2 |
| excision nuclease subunit a | SAMEA3753097_05172 | Not Available | Negative | 5158600 - 5161422 | 103874.0 |
| single-strand binding protein | SAMEA3753097_05173 | Not Available | Positive | 5161676 - 5162212 | 18976.1 |
| inner membrane protein | SAMEA3753097_05174 | Not Available | Negative | 5162311 - 5162592 | 10304.0 |
| putative coa transferase | SAMEA3753097_05177 | Not Available | Negative | 5164480 - 5164614 | 4819.69 |
| 3-dehydroquinate dehydratase | SAMEA3753097_05178 | Not Available | Negative | 5164760 - 5165518 | 27526.3 |
| quinate/shikimate dehydrogenase | SAMEA3753097_05179 | Not Available | Negative | 5165549 - 5166415 | 31278.7 |
| major facilitator superfamily protein | SAMEA3753097_05180 | Not Available | Negative | 5166427 - 5167692 | 46039.0 |
| major facilitator superfamily protein | SAMEA3753097_05181 | Not Available | Negative | 5167919 - 5169124 | 44260.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





