Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative electron transport protein ykgf | SAMEA3753097_05118 | Not Available | Positive | 5098595 - 5100022 | 52969.9 |
| transporter | SAMEA3753097_05119 | Not Available | Positive | 5100015 - 5100710 | 25081.9 |
| inner membrane protein | SAMEA3753097_05120 | Not Available | Negative | 5100953 - 5101519 | 21439.8 |
| choline dehydrogenase | SAMEA3753097_05121 | Not Available | Negative | 5101834 - 5103504 | 61855.1 |
| betaine aldehyde dehydrogenase | SAMEA3753097_05122 | Not Available | Negative | 5103518 - 5104990 | 52944.1 |
| transcriptional regulator beti | SAMEA3753097_05123 | Not Available | Negative | 5105004 - 5105591 | 21816.3 |
| high-affinity choline transport protein (bcct-family transporter) | SAMEA3753097_05124 | Not Available | Positive | 5105720 - 5107753 | 75846.5 |
| putative signal transduction protein | SAMEA3753097_05125 | Not Available | Positive | 5108628 - 5109716 | 40741.3 |
| lysr family transcriptional regulator | SAMEA3753097_05126 | Not Available | Negative | 5109758 - 5110690 | 34768.9 |
| inner membrane protein | SAMEA3753097_05127 | Not Available | Negative | 5110782 - 5111279 | 17330.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





