Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | SAMEA3753097_05098 | Not Available | Positive | 5078920 - 5079210 | 10614.1 |
| uncharacterised protein | SAMEA3753097_05099 | Not Available | Positive | 5079574 - 5079948 | 14274.0 |
| uncharacterized protein containing caspase domain | SAMEA3753097_05100 | Not Available | Positive | 5079958 - 5080911 | 35083.8 |
| uncharacterised protein | SAMEA3753097_05101 | Not Available | Negative | 5081652 - 5081759 | 4175.09 |
| hef nuclease | SAMEA3753097_05102 | Not Available | Negative | 5082278 - 5084878 | 98771.4 |
| transposase | SAMEA3753097_05103 | Not Available | Negative | 5085316 - 5086425 | 41978.2 |
| transposase | SAMEA3753097_05104 | Not Available | Negative | 5086431 - 5087108 | 25262.9 |
| transposase for insertion sequence is100 | SAMEA3753097_05105 | Not Available | Positive | 5087113 - 5087487 | 14906.2 |
| intestinal colonization factor encoded by prophage cp-933o | SAMEA3753097_05106 | Not Available | Positive | 5088284 - 5089042 | 27760.8 |
| uncharacterised protein | SAMEA3753097_05107 | Not Available | Positive | 5089328 - 5089750 | 16706.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





