Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stable plasmid inheritance protein pemi | SAMEA3753097_05056 | Not Available | Negative | 5027162 - 5027419 | 9333.16 |
| caax amino protease | SAMEA3753097_05057 | Not Available | Negative | 5027512 - 5028165 | 24308.9 |
| putative transposase | SAMEA3753097_05058 | Not Available | Negative | 5028253 - 5030049 | 67380.7 |
| drug/metabolite transporter | SAMEA3753097_05059 | Not Available | Positive | 5030538 - 5031422 | 31150.6 |
| tetracycline efflux protein | SAMEA3753097_05060 | Not Available | Negative | 5031454 - 5032653 | 42243.5 |
| tetracycline repressor protein | SAMEA3753097_05061 | Not Available | Positive | 5032732 - 5033409 | 24316.8 |
| uncharacterised protein | SAMEA3753097_05062 | Not Available | Positive | 5034289 - 5034492 | 7884.64 |
| replication protein of incfii family | SAMEA3753097_05063 | Not Available | Negative | 5034567 - 5035424 | 32677.6 |
| replication regulatory protein repa2 (protein copb) | SAMEA3753097_05065 | Not Available | Negative | 5035716 - 5035976 | 10038.3 |
| putative diguanylate cyclase | SAMEA3753097_05066 | Not Available | Negative | 5036259 - 5037617 | 51800.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





