Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SAMEA3753097_05001 | Not Available | Positive | 4988482 - 4988892 | 15467.8 |
| uncharacterised protein | SAMEA3753097_05002 | Not Available | Positive | 4990010 - 4990207 | 7278.68 |
| adenine-specific dna methylase | SAMEA3753097_05038 | Not Available | Negative | 5014280 - 5014843 | 21067.7 |
| domain of uncharacterised function (duf3560) | SAMEA3753097_05039 | Not Available | Negative | 5014891 - 5016252 | 51754.2 |
| uncharacterised protein | SAMEA3753097_05040 | Not Available | Negative | 5016304 - 5016534 | 8582.57 |
| plasmid protein | SAMEA3753097_05041 | Not Available | Negative | 5017576 - 5017767 | 7264.75 |
| putative dna methylase | SAMEA3753097_05042 | Not Available | Negative | 5017764 - 5018186 | 15587.4 |
| putative antirestriction protein | SAMEA3753097_05043 | Not Available | Negative | 5018233 - 5018658 | 16202.3 |
| ycha | SAMEA3753097_05044 | Not Available | Negative | 5019072 - 5019842 | 28728.4 |
| protein of uncharacterised function (duf1380) | SAMEA3753097_05045 | Not Available | Negative | 5019887 - 5020321 | 16001.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





