Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t3ss secreted effector nlei/nleg-like protein | SAMEA3753097_04980 | Not Available | Negative | 4962805 - 4963383 | 20351.3 |
| putative outer membrane lom | SAMEA3753097_04981 | Not Available | Negative | 4963555 - 4964010 | 16564.7 |
| tail component of prophage | SAMEA3753097_04982 | Not Available | Negative | 4964079 - 4964978 | 32623.8 |
| inner membrane protein | SAMEA3753097_04983 | Not Available | Positive | 4965586 - 4966179 | 21934.7 |
| putatve transcriptional regulator ykga | SAMEA3753097_04984 | Not Available | Positive | 4966769 - 4967626 | 33864.7 |
| ig domain-containing protein | SAMEA3753097_04985 | Not Available | Negative | 4967747 - 4971832 | 143358.0 |
| small predicted membrane protein | SAMEA3753097_04986 | Not Available | Positive | 4973032 - 4973133 | 3999.01 |
| 50s ribosomal protein l31 | SAMEA3753097_04987 | Not Available | Positive | 4973494 - 4973760 | 10051.9 |
| 50s ribosomal protein l36 | SAMEA3753097_04988 | Not Available | Positive | 4973760 - 4973900 | 5466.94 |
| putative fimbrial transcriptional regulator | SAMEA3753097_04989 | Not Available | Positive | 4974985 - 4975527 | 21205.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





