Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin superfamily protein family | SAMEA3753097_04970 | Not Available | Positive | 4953638 - 4954759 | 42567.2 |
| peptidase t | SAMEA3753097_04971 | Not Available | Negative | 4954808 - 4956034 | 44898.0 |
| spermidine/putrescine abc transporter atp-binding protein | SAMEA3753097_04972 | Not Available | Positive | 4956284 - 4957420 | 43044.8 |
| spermidine/putrescine abc transporter membrane protein | SAMEA3753097_04973 | Not Available | Positive | 4957404 - 4958267 | 32384.4 |
| t3ss effector espm | SAMEA3753097_04974 | Not Available | Negative | 4958541 - 4959131 | 22419.6 |
| t3ss secreted effector nleg-like protein | SAMEA3753097_04975 | Not Available | Positive | 4959314 - 4959964 | 24412.2 |
| t3ss effector espw | SAMEA3753097_04976 | Not Available | Positive | 4960039 - 4961097 | 40034.9 |
| t3ss effector nleg | SAMEA3753097_04977 | Not Available | Negative | 4961225 - 4961647 | 15750.7 |
| t3ss effector nleg | SAMEA3753097_04978 | Not Available | Negative | 4961696 - 4961860 | 5675.8 |
| t3ss effector nleg | SAMEA3753097_04979 | Not Available | Negative | 4961933 - 4962514 | 21086.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





