Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merr family transcriptional regulator | SAMEA3753097_04960 | Not Available | Positive | 4943023 - 4943754 | 28266.2 |
| protein | SAMEA3753097_04961 | Not Available | Positive | 4943975 - 4944379 | 15770.0 |
| isocitrate dehydrogenase | SAMEA3753097_04962 | Not Available | Negative | 4945505 - 4946755 | 45787.4 |
| ribosomal large subunit pseudouridine synthase e (rrna pseudouridylate synthase e) | SAMEA3753097_04963 | Not Available | Positive | 4946927 - 4947580 | 24871.8 |
| putative nudix-family hydrolase | SAMEA3753097_04964 | Not Available | Positive | 4947590 - 4948051 | 17433.8 |
| pp_04715 | SAMEA3753097_04965 | Not Available | Positive | 4948105 - 4949211 | Not Available |
| putative lysogenization regulator | SAMEA3753097_04966 | Not Available | Positive | 4949247 - 4949888 | 22949.0 |
| adenylosuccinate lyase | SAMEA3753097_04967 | Not Available | Positive | 4949892 - 4951262 | 51544.7 |
| two-component response regulator | SAMEA3753097_04968 | Not Available | Positive | 4951431 - 4952102 | 25567.8 |
| two-component sensor kinase | SAMEA3753097_04969 | Not Available | Positive | 4952102 - 4953562 | 55316.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





