Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein l | SAMEA3753097_04940 | Not Available | Positive | 4930284 - 4931462 | 44222.3 |
| general secretion pathway protein yghd | SAMEA3753097_04941 | Not Available | Positive | 4931464 - 4932000 | 20348.6 |
| ybl125 | SAMEA3753097_04942 | Not Available | Negative | 4932281 - 4932853 | 21829.0 |
| aec78 | SAMEA3753097_04943 | Not Available | Negative | 4932950 - 4933192 | 9213.93 |
| aec77 | SAMEA3753097_04944 | Not Available | Negative | 4933159 - 4933647 | 18028.5 |
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3753097_04945 | Not Available | Negative | 4933644 - 4934021 | 14180.0 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3753097_04946 | Not Available | Negative | 4934111 - 4934479 | 13550.0 |
| uncharacterised protein | SAMEA3753097_04947 | Not Available | Negative | 4934529 - 4934642 | 4260.86 |
| cp4-44 prophage | SAMEA3753097_04948 | Not Available | Negative | 4934642 - 4934863 | 8409.23 |
| putative dna repair protein | SAMEA3753097_04949 | Not Available | Negative | 4934926 - 4935402 | 17647.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





