Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system lipoprotein | SAMEA3753097_04930 | Not Available | Positive | 4921111 - 4921521 | 14700.8 |
| type ii secretion protein gspc | SAMEA3753097_04931 | Not Available | Positive | 4921680 - 4922498 | 29948.0 |
| type ii secretion system protein d | SAMEA3753097_04932 | Not Available | Positive | 4922528 - 4924588 | 74206.1 |
| type ii secretion system protein e | SAMEA3753097_04933 | Not Available | Positive | 4924588 - 4926081 | 55207.8 |
| type ii secretion system protein f | SAMEA3753097_04934 | Not Available | Positive | 4926081 - 4927304 | 44894.7 |
| general secretion pathway protein g precursor (epsg-like) | SAMEA3753097_04935 | Not Available | Positive | 4927321 - 4927776 | 16663.8 |
| type ii secretion system protein h | SAMEA3753097_04936 | Not Available | Positive | 4927780 - 4928343 | 21094.6 |
| type ii secretion system protein i | SAMEA3753097_04937 | Not Available | Positive | 4928340 - 4928711 | 13496.2 |
| type ii secretion protein gspj | SAMEA3753097_04938 | Not Available | Positive | 4928708 - 4929307 | 22251.2 |
| type ii secretion system protein k | SAMEA3753097_04939 | Not Available | Positive | 4929310 - 4930287 | 36523.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





