Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytoplasmic protein yjbr | SAMEA3753097_04908 | Not Available | Positive | 4888121 - 4888489 | 14050.2 |
| oxygen-insensitive nad(p)h nitroreductase | SAMEA3753097_04909 | Not Available | Positive | 4888583 - 4889236 | 23860.3 |
| putative mechanosensitive ion channel protein | SAMEA3753097_04910 | Not Available | Positive | 4889494 - 4890741 | 46605.5 |
| phenylalanine transporter | SAMEA3753097_04911 | Not Available | Negative | 4890809 - 4892185 | 50648.3 |
| cation efflux system protein | SAMEA3753097_04912 | Not Available | Negative | 4892287 - 4895430 | 114760.0 |
| cation efflux system protein | SAMEA3753097_04913 | Not Available | Negative | 4895442 - 4896665 | 44427.4 |
| cation efflux system protein | SAMEA3753097_04914 | Not Available | Negative | 4896681 - 4897013 | 12227.8 |
| copper/silver efflux system outer membrane protein cusc | SAMEA3753097_04915 | Not Available | Negative | 4897037 - 4898419 | 50743.0 |
| two-component system response regulator | SAMEA3753097_04916 | Not Available | Positive | 4898576 - 4899259 | 25396.1 |
| sensor kinase cuss | SAMEA3753097_04917 | Not Available | Positive | 4899249 - 4900691 | 53778.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





