Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilin precursor | SAMEA3753097_04895 | Not Available | Negative | 4878513 - 4878878 | 12770.2 |
| uncharacterised protein | SAMEA3753097_04896 | Not Available | Positive | 4878996 - 4879229 | 8773.78 |
| conjugation transfer regulator | SAMEA3753097_04897 | Not Available | Negative | 4879233 - 4879919 | 26478.7 |
| incf transfer protein tram | SAMEA3753097_04898 | Not Available | Negative | 4880110 - 4880493 | 14543.4 |
| putative transglycosylase | SAMEA3753097_04899 | Not Available | Positive | 4880770 - 4881417 | 24558.9 |
| yubp | SAMEA3753097_04900 | Not Available | Negative | 4881714 - 4882535 | 31587.7 |
| uncharacterised protein | SAMEA3753097_04901 | Not Available | Negative | 4882653 - 4882940 | 11007.2 |
| rna-directed dna polymerase (group ii intron maturase) | SAMEA3753097_04903 | Not Available | Positive | 4884536 - 4885810 | 49478.4 |
| carboxylate-amine ligase | SAMEA3753097_04906 | Not Available | Positive | 4886624 - 4887742 | 41660.7 |
| membrane protein ybdj | SAMEA3753097_04907 | Not Available | Positive | 4887808 - 4888056 | 9403.99 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





