Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | SAMEA3753097_04865 | Not Available | Negative | 4854442 - 4856031 | 57317.4 |
| incf transfer coupling protein trad | SAMEA3753097_04866 | Not Available | Negative | 4856696 - 4857340 | 24610.3 |
| conjugal transfer surface exclusion protein trat | SAMEA3753097_04867 | Not Available | Negative | 4857592 - 4858326 | 26033.4 |
| conjugal transfer entry exclusion protein tras | SAMEA3753097_04868 | Not Available | Negative | 4858348 - 4858869 | 19518.9 |
| conjugative transfer protein | SAMEA3753097_04869 | Not Available | Negative | 4858902 - 4861718 | 102492.0 |
| conjugal transfer pilus assembly protein trah | SAMEA3753097_04870 | Not Available | Negative | 4861715 - 4863091 | 50343.4 |
| conjugal transfer protein trbf | SAMEA3753097_04871 | Not Available | Negative | 4863088 - 4863468 | 14480.5 |
| conjugal transfer protein trbj | SAMEA3753097_04872 | Not Available | Negative | 4863455 - 4863736 | 10107.4 |
| conjugative transfer protein | SAMEA3753097_04873 | Not Available | Negative | 4863726 - 4864271 | 19733.8 |
| conjugative transfer protein | SAMEA3753097_04874 | Not Available | Negative | 4864258 - 4864542 | 10866.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





