Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | SAMEA3753097_04855 | Not Available | Positive | 4846242 - 4847306 | 39250.4 |
| endonuclease v | SAMEA3753097_04856 | Not Available | Positive | 4847316 - 4847987 | 24673.9 |
| protein of uncharacterised function (duf416) | SAMEA3753097_04857 | Not Available | Positive | 4848030 - 4848620 | 22613.9 |
| dna-binding protein hu-alpha | SAMEA3753097_04858 | Not Available | Positive | 4848807 - 4849079 | 9535.51 |
| membrane protein | SAMEA3753097_04859 | Not Available | Positive | 4849152 - 4849787 | 23997.1 |
| zinc resistance protein | SAMEA3753097_04860 | Not Available | Negative | 4849789 - 4850208 | 15042.1 |
| uncharacterised protein | SAMEA3753097_04861 | Not Available | Negative | 4850211 - 4850339 | 5024.87 |
| sensor protein zras | SAMEA3753097_04862 | Not Available | Positive | 4850446 - 4851822 | 50462.0 |
| two-component system response regulator | SAMEA3753097_04863 | Not Available | Positive | 4851819 - 4853144 | 48355.4 |
| phosphoribosylglycineamide synthetase | SAMEA3753097_04864 | Not Available | Negative | 4853141 - 4854430 | 45899.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





