Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | SAMEA3753097_04844 | Not Available | Positive | 4830690 - 4834718 | 150641.0 |
| dna-directed rna polymerase subunit beta | SAMEA3753097_04845 | Not Available | Positive | 4834795 - 4839018 | 155169.0 |
| thiamine biosynthesis protein | SAMEA3753097_04846 | Not Available | Negative | 4839260 - 4840393 | 43343.6 |
| thiamin biosynthesis, thiazole moiety | SAMEA3753097_04847 | Not Available | Negative | 4840390 - 4841160 | 26893.7 |
| sulfur carrier protein this | SAMEA3753097_04848 | Not Available | Negative | 4841162 - 4841362 | 7367.83 |
| thiazole biosynthesis protein thif | SAMEA3753097_04849 | Not Available | Negative | 4841346 - 4842101 | 26979.4 |
| thiamine-phosphate pyrophosphorylase | SAMEA3753097_04850 | Not Available | Negative | 4842094 - 4842729 | 22999.7 |
| thiamine biosynthesis protein thic | SAMEA3753097_04851 | Not Available | Negative | 4842729 - 4844624 | 70852.4 |
| regulator of sigma d | SAMEA3753097_04853 | Not Available | Negative | 4844858 - 4845334 | 18243.9 |
| nadh pyrophosphatase | SAMEA3753097_04854 | Not Available | Positive | 4845429 - 4846202 | 29690.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





