Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate transporter | SAMEA3753097_04769 | Not Available | Negative | 4755745 - 4756314 | 21633.9 |
| uncharacterised protein | SAMEA3753097_04770 | Not Available | Positive | 4756519 - 4756719 | 7444.3 |
| putative phage-related regulatory protein | SAMEA3753097_04771 | Not Available | Positive | 4758042 - 4758248 | 7861.64 |
| uncharacterised protein | SAMEA3753097_04772 | Not Available | Positive | 4758335 - 4758937 | 23600.4 |
| cp4-57 prophage protein | SAMEA3753097_04773 | Not Available | Negative | 4759259 - 4760743 | 55746.4 |
| protein disaggregation chaperone | SAMEA3753097_04774 | Not Available | Negative | 4761910 - 4764483 | 95590.8 |
| putative inner membrane protein | SAMEA3753097_04775 | Not Available | Negative | 4764613 - 4765344 | 26379.5 |
| 23s rrna pseudouridine synthase | SAMEA3753097_04776 | Not Available | Negative | 4765341 - 4766321 | 37109.8 |
| outer membrane protein assembly complex subunit yfio | SAMEA3753097_04777 | Not Available | Positive | 4766456 - 4767193 | 27830.9 |
| translation inhibitor protein raia | SAMEA3753097_04778 | Not Available | Positive | 4767464 - 4767805 | 12785.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





