Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts system eiic component | SAMEA3753097_04759 | Not Available | Positive | 4747211 - 4748467 | 44326.8 |
| putative transposase (partial) | SAMEA3753097_04760 | Not Available | Negative | 4748683 - 4748967 | 10925.4 |
| deoxyribose specific mutarotase | SAMEA3753097_04761 | Not Available | Negative | 4749389 - 4750402 | 38175.6 |
| major facilitator superfamily protein | SAMEA3753097_04762 | Not Available | Negative | 4750414 - 4751394 | 36191.9 |
| major facilitator superfamily protein | SAMEA3753097_04763 | Not Available | Negative | 4751345 - 4751731 | 14265.6 |
| deoxyribokinase | SAMEA3753097_04764 | Not Available | Negative | 4751759 - 4752679 | 33223.8 |
| transcriptional regulator | SAMEA3753097_04765 | Not Available | Positive | 4752982 - 4753764 | 29079.2 |
| uncharacterised protein | SAMEA3753097_04766 | Not Available | Negative | 4754624 - 4754755 | 4375.5 |
| ybl85 | SAMEA3753097_04767 | Not Available | Negative | 4754755 - 4755189 | 16616.9 |
| ybl85 | SAMEA3753097_04768 | Not Available | Negative | 4755177 - 4755578 | 15586.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





