Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3753097_04699 | Not Available | Negative | 4700051 - 4700338 | 10520.0 |
| transcriptional regulator | SAMEA3753097_04700 | Not Available | Positive | 4700535 - 4700873 | 12839.4 |
| pi protein (replication initiation protein) | SAMEA3753097_04701 | Not Available | Negative | 4702052 - 4702861 | 30814.4 |
| is186, transposase | SAMEA3753097_04702 | Not Available | Positive | 4704170 - 4705282 | 40911.1 |
| transposase | SAMEA3753097_04703 | Not Available | Positive | 4705305 - 4705445 | 5345.71 |
| uncharacterised protein | SAMEA3753097_04704 | Not Available | Positive | 4705500 - 4705823 | 12104.5 |
| uncharacterised protein | SAMEA3753097_04705 | Not Available | Positive | 4705865 - 4706089 | 8158.99 |
| uncharacterised protein | SAMEA3753097_04706 | Not Available | Positive | 4706185 - 4706409 | 8217.91 |
| uncharacterised protein | SAMEA3753097_04707 | Not Available | Positive | 4706460 - 4706726 | 10200.2 |
| yaja protein | SAMEA3753097_04708 | Not Available | Positive | 4706701 - 4706958 | 9920.01 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





