Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease iga1 | SAMEA3753097_04688 | Not Available | Positive | 4688190 - 4692281 | 145511.0 |
| conjugal transfer protein trag | SAMEA3753097_04690 | Not Available | Negative | 4693804 - 4694001 | 7454.21 |
| uncharacterised protein | SAMEA3753097_04691 | Not Available | Negative | 4694001 - 4694135 | 4870.96 |
| conjugal transfer protein | SAMEA3753097_04692 | Not Available | Negative | 4694132 - 4696504 | 89039.5 |
| conjugal transfer protein trad | SAMEA3753097_04693 | Not Available | Negative | 4696507 - 4696827 | 11895.1 |
| conjugal transfer prepropilin | SAMEA3753097_04694 | Not Available | Negative | 4696885 - 4697199 | 11347.2 |
| conjugal transfer protein | SAMEA3753097_04695 | Not Available | Negative | 4697171 - 4697782 | 22306.2 |
| conjugal transfer protein | SAMEA3753097_04696 | Not Available | Positive | 4698126 - 4699121 | 35180.3 |
| conjugal transfer protein trbj | SAMEA3753097_04697 | Not Available | Positive | 4699123 - 4699764 | 24451.7 |
| uncharacterised protein | SAMEA3753097_04698 | Not Available | Positive | 4699777 - 4700010 | 8860.84 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





