Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor | SAMEA3753097_04614 | Not Available | Positive | 4633992 - 4634564 | 20641.7 |
| shikimate dehydrogenase | SAMEA3753097_04615 | Not Available | Positive | 4634569 - 4635387 | 29481.4 |
| transcriptional regulator | SAMEA3753097_04616 | Not Available | Positive | 4635384 - 4635641 | 10007.5 |
| putative transferase | SAMEA3753097_04617 | Not Available | Negative | 4635617 - 4636171 | 20246.3 |
| Trna-glu | Not Available | Not Available | Positive | 4638271 - 4638346 | Not Available |
| parb family protein | SAMEA3753097_04682 | Not Available | Positive | 4679680 - 4680576 | 33992.5 |
| ybl116 | SAMEA3753097_04683 | Not Available | Positive | 4680573 - 4681469 | 33838.4 |
| phage related protein | SAMEA3753097_04685 | Not Available | Positive | 4684779 - 4685063 | 11041.2 |
| insertion sequence is100, atp-binding protein | SAMEA3753097_04686 | Not Available | Negative | 4685149 - 4685928 | 29324.6 |
| is5 transposase and trans-activator | SAMEA3753097_04687 | Not Available | Positive | 4687001 - 4687345 | 13605.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





