Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| raffinose invertase | SAMEA3753097_04531 | Not Available | Positive | 4567547 - 4568977 | 53855.5 |
| glucose-specific pts system eiia component | SAMEA3753097_04532 | Not Available | Positive | 4569041 - 4569556 | 18054.8 |
| aminoimidazole riboside kinase | SAMEA3753097_04533 | Not Available | Positive | 4570168 - 4571094 | 32793.4 |
| sucrose porin | SAMEA3753097_04534 | Not Available | Positive | 4571194 - 4572690 | 54465.4 |
| is1414, transposase | SAMEA3753097_04535 | Not Available | Negative | 4572927 - 4573703 | 29755.1 |
| reverse transcriptase-like protein from prophage or plasmid | SAMEA3753097_04537 | Not Available | Positive | 4575171 - 4576694 | 58568.4 |
| putative transposase | SAMEA3753097_04539 | Not Available | Positive | 4576889 - 4577260 | 14439.9 |
| uncharacterised protein | SAMEA3753097_04540 | Not Available | Positive | 4577341 - 4577514 | 6705.18 |
| putative excisionase | SAMEA3753097_04541 | Not Available | Positive | 4577619 - 4577813 | 7435.9 |
| uncharacterised protein | SAMEA3753097_04542 | Not Available | Positive | 4577816 - 4580497 | 100178.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





