Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3753097_04521 | Not Available | Negative | 4555578 - 4557182 | 62395.5 |
| putative alpa-family regulatory protein from prophage | SAMEA3753097_04522 | Not Available | Positive | 4557961 - 4558188 | 9116.15 |
| uncharacterised protein | SAMEA3753097_04523 | Not Available | Positive | 4558254 - 4558997 | 28596.5 |
| cp4-6 prophage | SAMEA3753097_04524 | Not Available | Positive | 4559219 - 4559779 | 21188.0 |
| cp4-6 prophage protein | SAMEA3753097_04525 | Not Available | Positive | 4560161 - 4560775 | 23619.9 |
| malate transporter | SAMEA3753097_04526 | Not Available | Positive | 4560803 - 4561369 | 21306.8 |
| is2 element protein | SAMEA3753097_04527 | Not Available | Negative | 4561576 - 4562562 | 37508.8 |
| hth-type transcriptional regulator rafr | SAMEA3753097_04528 | Not Available | Positive | 4562988 - 4563998 | 36824.0 |
| alpha-galactosidase | SAMEA3753097_04529 | Not Available | Positive | 4564092 - 4566218 | 80621.9 |
| raffinose permease rafb | SAMEA3753097_04530 | Not Available | Positive | 4566273 - 4567550 | 46535.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





