Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic glycerol-3-phosphate dehydrogenase subunit a | SAMEA3753097_04501 | Not Available | Positive | 4527036 - 4528664 | 58991.7 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit b | SAMEA3753097_04502 | Not Available | Positive | 4528654 - 4529913 | 45345.9 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | SAMEA3753097_04503 | Not Available | Positive | 4529910 - 4531100 | 44110.4 |
| putative transposase | SAMEA3753097_04504 | Not Available | Positive | 4531293 - 4532192 | 34892.8 |
| putative transposase (fragment) | SAMEA3753097_04505 | Not Available | Positive | 4532205 - 4532390 | 6881.16 |
| putative carbon-carbon lyase | SAMEA3753097_04506 | Not Available | Negative | 4532431 - 4533234 | 28917.7 |
| transport protein yfav | SAMEA3753097_04507 | Not Available | Negative | 4533252 - 4534541 | 46197.3 |
| mandelate racemase/muconate lactonizing protein | SAMEA3753097_04508 | Not Available | Negative | 4534598 - 4535803 | 44229.0 |
| transcriptional regulator yfax | SAMEA3753097_04509 | Not Available | Negative | 4535818 - 4536600 | 28905.8 |
| putative molybdopterin-binding protein | SAMEA3753097_04510 | Not Available | Negative | 4536820 - 4538022 | 44200.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





