Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate and nitrate reduction regulatory protein | SAMEA3753097_04338 | Not Available | Negative | 4392992 - 4393744 | 27968.9 |
| methylated-dna--protein-cysteine methyltransferase | SAMEA3753097_04339 | Not Available | Negative | 4393939 - 4394454 | 19166.2 |
| arac family transcriptional regulator | SAMEA3753097_04341 | Not Available | Negative | 4394997 - 4395812 | 30537.3 |
| secretion protein | SAMEA3753097_04342 | Not Available | Positive | 4395909 - 4396937 | 37719.2 |
| multidrug resistance protein b | SAMEA3753097_04343 | Not Available | Positive | 4396937 - 4398448 | 55451.7 |
| smr domain protein | SAMEA3753097_04344 | Not Available | Positive | 4398643 - 4399206 | 21563.8 |
| putative signaling protein | SAMEA3753097_04345 | Not Available | Negative | 4399227 - 4400459 | 46438.9 |
| zinc transport protein | SAMEA3753097_04346 | Not Available | Positive | 4400714 - 4401697 | 36614.3 |
| uncharacterised protein | SAMEA3753097_04348 | Not Available | Positive | 4401972 - 4402145 | 6427.87 |
| atp-independent rna helicase | SAMEA3753097_04349 | Not Available | Positive | 4402175 - 4403548 | 49214.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





