Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellin | SAMEA3753097_04307 | Not Available | Negative | 4361151 - 4362908 | 59956.8 |
| integrase | SAMEA3753097_04309 | Not Available | Negative | 4363870 - 4364562 | 25504.4 |
| t3ss secreted effector nleh-like protein | SAMEA3753097_04310 | Not Available | Positive | 4365036 - 4365947 | 33707.6 |
| t3ss effector nlef | SAMEA3753097_04311 | Not Available | Positive | 4366013 - 4366582 | 21375.1 |
| transposase | SAMEA3753097_04312 | Not Available | Negative | 4366629 - 4366886 | 9976.21 |
| transposase | SAMEA3753097_04313 | Not Available | Negative | 4366916 - 4367263 | 13263.5 |
| uncharacterised protein | SAMEA3753097_04314 | Not Available | Positive | 4367714 - 4367953 | 8661.69 |
| binding-protein-dependent transport system inner membrane protein | SAMEA3753097_04315 | Not Available | Positive | 4368884 - 4369519 | 24008.9 |
| binding-protein-dependent transport system inner membrane protein | SAMEA3753097_04316 | Not Available | Positive | 4369506 - 4370348 | 31252.2 |
| zinc-type alcohol dehydrogenase-like protein ycjq | SAMEA3753097_04317 | Not Available | Positive | 4370379 - 4371431 | 38218.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





