Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uvrabc system protein c | SAMEA3753097_04297 | Not Available | Negative | 4351916 - 4353748 | 68192.0 |
| response regulator uvry | SAMEA3753097_04298 | Not Available | Negative | 4353745 - 4354401 | 23894.1 |
| conserved protein, duf2594 family | SAMEA3753097_04299 | Not Available | Positive | 4354860 - 4355084 | 8239.04 |
| dna-binding transcriptional activator sdia | SAMEA3753097_04300 | Not Available | Negative | 4355151 - 4355873 | 28088.8 |
| putative cystine abc-transporter, atp-binding protein | SAMEA3753097_04301 | Not Available | Negative | 4356103 - 4356855 | 27677.7 |
| putative amino acid transport protein abc superfamily | SAMEA3753097_04302 | Not Available | Negative | 4356852 - 4357520 | 24802.7 |
| d-cysteine desulfhydrase | SAMEA3753097_04303 | Not Available | Negative | 4357535 - 4358521 | 35155.4 |
| cystine transporter subunit | SAMEA3753097_04304 | Not Available | Negative | 4358626 - 4359483 | 31040.2 |
| fliz protein | SAMEA3753097_04305 | Not Available | Negative | 4359514 - 4360065 | 21558.0 |
| rna polymerase sigma factor for flagellar operon | SAMEA3753097_04306 | Not Available | Negative | 4360111 - 4360830 | 27549.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





