Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn7-like transposition protein tnsb | SAMEA3753097_04215 | Not Available | Positive | 4270506 - 4272629 | 81773.7 |
| tn7-like transposition protein tnsc | SAMEA3753097_04216 | Not Available | Positive | 4272629 - 4274077 | 54873.9 |
| tnsd | SAMEA3753097_04217 | Not Available | Positive | 4274118 - 4275674 | 59995.2 |
| uncharacterised protein | SAMEA3753097_04218 | Not Available | Positive | 4275686 - 4276612 | 35807.3 |
| transcriptional regulator | SAMEA3753097_04219 | Not Available | Positive | 4276965 - 4277264 | 11199.5 |
| atp/gtp-binding protein | SAMEA3753097_04220 | Not Available | Positive | 4277828 - 4279654 | 67765.5 |
| uncharacterized protein conserved in bacteria | SAMEA3753097_04221 | Not Available | Negative | 4279823 - 4280173 | 12940.8 |
| silver-binding protein sile | SAMEA3753097_04222 | Not Available | Negative | 4280321 - 4280752 | 15202.1 |
| sensor kinase cuss | SAMEA3753097_04223 | Not Available | Negative | 4280997 - 4282478 | 56128.7 |
| dna-binding transcriptional activator cusr | SAMEA3753097_04224 | Not Available | Negative | 4282471 - 4283151 | 25298.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





