Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | SAMEA3753097_04173 | Not Available | Positive | 4228028 - 4228966 | 32366.3 |
| protease | SAMEA3753097_04174 | Not Available | Negative | 4229029 - 4230096 | 37583.4 |
| serine endoprotease | SAMEA3753097_04175 | Not Available | Negative | 4230186 - 4231553 | 47207.9 |
| cytochrome d ubiquinol oxidase subunit iii | SAMEA3753097_04176 | Not Available | Negative | 4231707 - 4232105 | 14976.7 |
| putative atp/gtp-binding protein | SAMEA3753097_04177 | Not Available | Positive | 4232299 - 4233426 | 43068.1 |
| 50s ribosomal protein l13 | SAMEA3753097_04178 | Not Available | Positive | 4233645 - 4234073 | 16019.5 |
| 30s ribosomal protein s9 | SAMEA3753097_04179 | Not Available | Positive | 4234089 - 4234481 | 14857.1 |
| stringent starvation protein a | SAMEA3753097_04180 | Not Available | Positive | 4234876 - 4235514 | 24306.3 |
| stringent starvation protein b | SAMEA3753097_04181 | Not Available | Positive | 4235520 - 4236017 | 18263.4 |
| c4-dicarboxylate transporter | SAMEA3753097_04182 | Not Available | Negative | 4236060 - 4237427 | 48804.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





