Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-heptose--lps heptosyltransferase-like protein | SAMEA3753097_04111 | Not Available | Negative | 4167871 - 4168923 | 39533.5 |
| shikimate transporter | SAMEA3753097_04112 | Not Available | Positive | 4169238 - 4170554 | 47754.1 |
| amp nucleosidase | SAMEA3753097_04113 | Not Available | Positive | 4170656 - 4172110 | 54067.0 |
| putative cytoplasmic protein | SAMEA3753097_04114 | Not Available | Positive | 4172452 - 4173168 | 25854.5 |
| Trna-asn | Not Available | Not Available | Positive | 4173621 - 4173696 | Not Available |
| multidrug efflux system | SAMEA3753097_04116 | Not Available | Negative | 4173797 - 4175251 | 52822.1 |
| Trna-asn | Not Available | Not Available | Positive | 4175445 - 4175520 | Not Available |
| lysr family transcriptional regulator | SAMEA3753097_04118 | Not Available | Negative | 4175558 - 4176508 | 35858.0 |
| nitrogen assimilation regulatory protein nac | SAMEA3753097_04119 | Not Available | Negative | 4176610 - 4177527 | 32837.0 |
| Trna-asn | Not Available | Not Available | Positive | 4177854 - 4177929 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





