Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic trehalase | SAMEA3753097_04006 | Not Available | Positive | 4054222 - 4055871 | 63718.1 |
| transcriptional regulator | SAMEA3753097_04007 | Not Available | Negative | 4055922 - 4056524 | 22605.6 |
| lysr family transcriptional regulator | SAMEA3753097_04008 | Not Available | Positive | 4056972 - 4057943 | 36097.0 |
| pp_03820 | SAMEA3753097_04009 | Not Available | Positive | 4057992 - 4059005 | Not Available |
| major facilitator superfamily protein | SAMEA3753097_04010 | Not Available | Positive | 4059416 - 4060738 | 47210.9 |
| putative outer membrane assembly protein | SAMEA3753097_04011 | Not Available | Negative | 4060920 - 4062980 | 74461.8 |
| diguanylate phosphodiesterase | SAMEA3753097_04012 | Not Available | Negative | 4063050 - 4063817 | 29602.9 |
| ketodeoxygluconokinase | SAMEA3753097_04013 | Not Available | Positive | 4064049 - 4064978 | 33949.2 |
| putative protease | SAMEA3753097_04014 | Not Available | Negative | 4065074 - 4066570 | 55458.4 |
| c4-dicarboxylate transport protein | SAMEA3753097_04015 | Not Available | Negative | 4066791 - 4068077 | 45439.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





