Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylglycerophosphatase b | SAMEA3753097_03974 | Not Available | Negative | 4021640 - 4022404 | 29064.9 |
| gtp cyclohydrolase ii | SAMEA3753097_03975 | Not Available | Positive | 4022574 - 4023164 | 21837.3 |
| aconitate hydratase 1 | SAMEA3753097_03976 | Not Available | Negative | 4023228 - 4025903 | 97754.9 |
| protein, c-ter fragment, truncated protein | SAMEA3753097_03978 | Not Available | Negative | 4026276 - 4026443 | 6338.19 |
| small predicted membrane protein | SAMEA3753097_03979 | Not Available | Negative | 4026446 - 4026574 | 4866.05 |
| hth-type transcriptional regulator cysb | SAMEA3753097_03980 | Not Available | Negative | 4026905 - 4027879 | 36152.5 |
| dna topoisomerase i | SAMEA3753097_03981 | Not Available | Negative | 4028089 - 4030686 | 97355.0 |
| uncharacterised protein | SAMEA3753097_03982 | Not Available | Negative | 4030918 - 4031136 | 8325.18 |
| protease | SAMEA3753097_03983 | Not Available | Negative | 4031352 - 4032401 | 39372.7 |
| putative short chain dehydrogenase | SAMEA3753097_03984 | Not Available | Positive | 4032621 - 4033379 | 27934.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





