Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rcsf--phosphorelay glucose and zinc sensor | SAMEA3753097_03934 | Not Available | Negative | 3980452 - 3980856 | 14164.3 |
| d-methionine-binding transport system metq precursor | SAMEA3753097_03935 | Not Available | Negative | 3980974 - 3981789 | 29433.3 |
| d-methionine abc transporter permease | SAMEA3753097_03936 | Not Available | Negative | 3981829 - 3982482 | 23257.6 |
| d-methionine abc transporter atp-binding protein | SAMEA3753097_03937 | Not Available | Negative | 3982475 - 3983506 | 37804.7 |
| d,d-heptose 1,7-bisphosphate phosphatase | SAMEA3753097_03938 | Not Available | Positive | 3983694 - 3984269 | 21295.4 |
| exonuclease from phage origin | SAMEA3753097_03939 | Not Available | Positive | 3984625 - 3986706 | 77990.2 |
| integrase for prophage cp-933o | SAMEA3753097_03940 | Not Available | Positive | 3986997 - 3988127 | 43170.1 |
| binding-protein-dependent transport system inner membrane protein | SAMEA3753097_03941 | Not Available | Negative | 3988173 - 3988517 | 12999.0 |
| abc transporter substrate-binding protein | SAMEA3753097_03942 | Not Available | Negative | 3988538 - 3989830 | 46781.0 |
| sucrose phosphorylase | SAMEA3753097_03943 | Not Available | Negative | 3989844 - 3991523 | 64230.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





