Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase i family protein | SAMEA3753097_03924 | Not Available | Positive | 3972786 - 3973175 | 14707.4 |
| trna(ile)-lysidine synthetase | SAMEA3753097_03925 | Not Available | Positive | 3973240 - 3974538 | 48048.8 |
| rho-binding antiterminator | SAMEA3753097_03926 | Not Available | Negative | 3974587 - 3974847 | 9698.45 |
| putative cytoplasmic protein | SAMEA3753097_03927 | Not Available | Negative | 3974834 - 3975034 | 7214.59 |
| yaeq family protein | SAMEA3753097_03928 | Not Available | Positive | 3975200 - 3975745 | 20877.7 |
| putative peptidyl-trna hydrolase | SAMEA3753097_03929 | Not Available | Positive | 3975742 - 3976164 | 15577.9 |
| copper homeostasis protein (lipoprotein nlpe) | SAMEA3753097_03930 | Not Available | Positive | 3976178 - 3976888 | 25855.7 |
| putative lipoprotein | SAMEA3753097_03931 | Not Available | Negative | 3977043 - 3977510 | 17211.8 |
| prolyl-trna synthetase | SAMEA3753097_03932 | Not Available | Negative | 3977919 - 3979637 | 63640.2 |
| methyltransferase | SAMEA3753097_03933 | Not Available | Negative | 3979748 - 3980455 | 26381.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





