Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease viii (dna glycosylase/ap lyase nei) | SAMEA3753097_03813 | Not Available | Positive | 3852488 - 3853279 | 29867.8 |
| transport protein abrb | SAMEA3753097_03814 | Not Available | Negative | 3853276 - 3854322 | 36886.1 |
| putative fimbrial protein | SAMEA3753097_03815 | Not Available | Negative | 3854474 - 3855535 | 39595.7 |
| chaperone, papd family | SAMEA3753097_03816 | Not Available | Negative | 3855532 - 3856263 | 27209.9 |
| outer membrane protein | SAMEA3753097_03817 | Not Available | Negative | 3856452 - 3858728 | 83976.3 |
| putative fimbrial-like adhesin protein | SAMEA3753097_03818 | Not Available | Negative | 3858788 - 3859354 | 19899.2 |
| citrate synthase | SAMEA3753097_03819 | Not Available | Negative | 3859744 - 3861027 | 48017.7 |
| uncharacterised protein | SAMEA3753097_03820 | Not Available | Negative | 3861233 - 3861340 | 3827.66 |
| succinate dehydrogenase cytochrome b556 large membrane subunit | SAMEA3753097_03821 | Not Available | Positive | 3861721 - 3862125 | 14948.9 |
| succinate dehydrogenase hydrophobic membrane anchor protein | SAMEA3753097_03822 | Not Available | Positive | 3862119 - 3862466 | 12868.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





