Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein yigm | SAMEA3753097_03622 | Not Available | Positive | 3664548 - 3665447 | 33729.0 |
| trans-activator of mete and meth (lysr-family transcriptional regulator) | SAMEA3753097_03623 | Not Available | Negative | 3665335 - 3666288 | 35631.0 |
| 5- methyltetrahydropteroyltriglutamate/homocysteine s-methyltransferase | SAMEA3753097_03624 | Not Available | Positive | 3666525 - 3668786 | 84778.2 |
| putative hydrolase | SAMEA3753097_03625 | Not Available | Negative | 3668826 - 3669641 | 29425.8 |
| uridine phosphorylase | SAMEA3753097_03626 | Not Available | Positive | 3669903 - 3670664 | 27160.7 |
| dna recombination protein | SAMEA3753097_03627 | Not Available | Positive | 3670804 - 3672231 | 54767.6 |
| ubiquinone/menaquinone biosynthesis methyltransferase | SAMEA3753097_03628 | Not Available | Positive | 3672326 - 3673081 | 28074.8 |
| sterol-binding domain-containing protein | SAMEA3753097_03629 | Not Available | Positive | 3673095 - 3673700 | 22123.8 |
| ubiquinone biosynthesis protein | SAMEA3753097_03630 | Not Available | Positive | 3673697 - 3675337 | 63206.4 |
| twin arginine translocase protein a | SAMEA3753097_03631 | Not Available | Positive | 3675416 - 3675685 | 9664.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





