Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0374 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1347849 bp
Thymine Count
1349174 bp
Guanine Count
1357668 bp
Cytosine Count
1356575 bp
Genome Length
5412071 bp
Protein-coding Genes
4839 genes
Non-Coding Genes
458 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | SAMEA3753097_03580 | Not Available | Positive | 3627545 - 3628612 | 39796.0 |
| glucose-1-phosphate thymidylyltransferase | SAMEA3753097_03581 | Not Available | Positive | 3628631 - 3629512 | 32736.3 |
| tdp-fucosamine acetyltransferase | SAMEA3753097_03582 | Not Available | Positive | 3629490 - 3630164 | 24221.7 |
| dtdp-4-oxo-6-deoxy-d-glucose transaminase | SAMEA3753097_03583 | Not Available | Positive | 3630169 - 3631299 | 41903.4 |
| lipid iii flippase | SAMEA3753097_03584 | Not Available | Positive | 3631301 - 3632551 | 44962.3 |
| 4-alpha-l-fucosyltransferase | SAMEA3753097_03585 | Not Available | Positive | 3632548 - 3633627 | 40561.7 |
| putative eca polymerase | SAMEA3753097_03586 | Not Available | Positive | 3633624 - 3634976 | 51524.2 |
| udp-n-acetyl-d-mannosaminuronic acid transferase | SAMEA3753097_03587 | Not Available | Positive | 3634979 - 3635719 | 27972.8 |
| amino acid permease | SAMEA3753097_03588 | Not Available | Positive | 3635910 - 3637295 | 50402.1 |
| Trna-arg | Not Available | Not Available | Positive | 3637398 - 3637474 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





